WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C41G11.3a.3 Sequence Name  C41G11.3a.3
Length (nt)  2887   Chromosome Location  X: 5720381-5733672
Chromosome . Primary Identifier  X Chromosome Location . Start  5720381
Chromosome Location . End  5733672 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41G11.3a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004349 rgs-6 C41G11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41G11.3a C41G11.3a 2205   X: 5720888-5721403

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C41G11.3a.3 5720381 5733672 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234746   1023   X: 5720381-5721403 Caenorhabditis elegans
Exon234753   168   X: 5722261-5722428 Caenorhabditis elegans
Exon234757   102   X: 5722477-5722578 Caenorhabditis elegans
Exon234761   200   X: 5722679-5722878 Caenorhabditis elegans
Exon234765   194   X: 5723496-5723689 Caenorhabditis elegans
Exon234769   227   X: 5724080-5724306 Caenorhabditis elegans
Exon234773   161   X: 5726126-5726286 Caenorhabditis elegans
Exon234778   84   X: 5726461-5726544 Caenorhabditis elegans
Exon234782   130   X: 5726753-5726882 Caenorhabditis elegans
Exon234786   156   X: 5726929-5727084 Caenorhabditis elegans
Exon234790   132   X: 5727128-5727259 Caenorhabditis elegans
Exon234794   154   X: 5728503-5728656 Caenorhabditis elegans
Exon234802   156   X: 5733517-5733672 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C41G11.3a.3 5720381 5733672 -1

1 Sequence

Length
2887

1 Sequence Ontology Term

Identifier Name Description
transcript