WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C41G11.3a.2 Sequence Name  C41G11.3a.2
Length (nt)  2941   Chromosome Location  X: 5720381-5733778
Chromosome . Primary Identifier  X Chromosome Location . Start  5720381
Chromosome Location . End  5733778 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41G11.3a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004349 rgs-6 C41G11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41G11.3a C41G11.3a 2205   X: 5720888-5721403

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C41G11.3a.2 5720381 5733778 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234747   1023   X: 5720381-5721403 Caenorhabditis elegans
Exon234752   168   X: 5722261-5722428 Caenorhabditis elegans
Exon234756   102   X: 5722477-5722578 Caenorhabditis elegans
Exon234760   200   X: 5722679-5722878 Caenorhabditis elegans
Exon234764   194   X: 5723496-5723689 Caenorhabditis elegans
Exon234768   227   X: 5724080-5724306 Caenorhabditis elegans
Exon234772   161   X: 5726126-5726286 Caenorhabditis elegans
Exon234777   84   X: 5726461-5726544 Caenorhabditis elegans
Exon234781   130   X: 5726753-5726882 Caenorhabditis elegans
Exon234785   156   X: 5726929-5727084 Caenorhabditis elegans
Exon234789   132   X: 5727128-5727259 Caenorhabditis elegans
Exon234793   154   X: 5728503-5728656 Caenorhabditis elegans
Exon234801   154   X: 5733517-5733670 Caenorhabditis elegans
Exon234803   56   X: 5733723-5733778 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C41G11.3a.2 5720381 5733778 -1

1 Sequence

Length
2941

1 Sequence Ontology Term

Identifier Name Description
transcript