WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C41G11.3b.1 Sequence Name  C41G11.3b.1
Length (nt)  2997   Chromosome Location  X: 5720440-5729023
Chromosome . Primary Identifier  X Chromosome Location . Start  5720440
Chromosome Location . End  5729023 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41G11.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004349 rgs-6 C41G11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41G11.3b C41G11.3b 2163   X: 5720888-5721403

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C41G11.3b.1 5720440 5729023 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234748   964   X: 5720440-5721403 Caenorhabditis elegans
Exon234754   126   X: 5722303-5722428 Caenorhabditis elegans
Exon234758   102   X: 5722477-5722578 Caenorhabditis elegans
Exon234762   200   X: 5722679-5722878 Caenorhabditis elegans
Exon234766   194   X: 5723496-5723689 Caenorhabditis elegans
Exon234770   227   X: 5724080-5724306 Caenorhabditis elegans
Exon234774   161   X: 5726126-5726286 Caenorhabditis elegans
Exon234779   84   X: 5726461-5726544 Caenorhabditis elegans
Exon234783   130   X: 5726753-5726882 Caenorhabditis elegans
Exon234787   156   X: 5726929-5727084 Caenorhabditis elegans
Exon234791   132   X: 5727128-5727259 Caenorhabditis elegans
Exon234795   521   X: 5728503-5729023 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C41G11.3b.1 5720440 5729023 -1

1 Sequence

Length
2997

1 Sequence Ontology Term

Identifier Name Description
transcript