WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C41G11.4c.1 Sequence Name  C41G11.4c.1
Length (nt)  1858   Chromosome Location  X: 5738763-5743309
Chromosome . Primary Identifier  X Chromosome Location . Start  5738763
Chromosome Location . End  5743309 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41G11.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016570 gnrr-4 C41G11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41G11.4c C41G11.4c 1536   X: 5739026-5739178

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C41G11.4c.1 5738763 5743309 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234811   416   X: 5738763-5739178 Caenorhabditis elegans
Exon234817   89   X: 5739613-5739701 Caenorhabditis elegans
Exon234820   177   X: 5739960-5740136 Caenorhabditis elegans
Exon234825   102   X: 5740189-5740290 Caenorhabditis elegans
Exon234829   128   X: 5740383-5740510 Caenorhabditis elegans
Exon234833   140   X: 5741107-5741246 Caenorhabditis elegans
Exon234837   87   X: 5741293-5741379 Caenorhabditis elegans
Exon234841   118   X: 5741634-5741751 Caenorhabditis elegans
Exon234845   137   X: 5741798-5741934 Caenorhabditis elegans
Exon234849   138   X: 5741982-5742119 Caenorhabditis elegans
Exon234853   133   X: 5742683-5742815 Caenorhabditis elegans
Exon234857   77   X: 5743067-5743143 Caenorhabditis elegans
Exon234862   116   X: 5743194-5743309 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C41G11.4c.1 5738763 5743309 -1

1 Sequence

Length
1858

1 Sequence Ontology Term

Identifier Name Description
transcript