WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13D11.2b.1 Sequence Name  F13D11.2b.1
Length (nt)  2883   Chromosome Location  X: 5823132-5826361
Chromosome . Primary Identifier  X Chromosome Location . Start  5823132
Chromosome Location . End  5826361 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13D11.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001824 hbl-1 F13D11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13D11.2b F13D11.2b 2883   X: 5823132-5823178

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13D11.2b.1 5823132 5826361 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235049   47   X: 5823132-5823178 Caenorhabditis elegans
Exon235051   196   X: 5823265-5823460 Caenorhabditis elegans
Exon235053   1608   X: 5823516-5825123 Caenorhabditis elegans
Exon235055   568   X: 5825175-5825742 Caenorhabditis elegans
Exon235057   122   X: 5825789-5825910 Caenorhabditis elegans
Exon235059   210   X: 5825959-5826168 Caenorhabditis elegans
Exon235060   132   X: 5826230-5826361 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13D11.2b.1 5823132 5826361 1

1 Sequence

Length
2883

1 Sequence Ontology Term

Identifier Name Description
transcript