WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13D11.4.1 Sequence Name  F13D11.4.1
Length (nt)  1188   Chromosome Location  X: 5831929-5834805
Chromosome . Primary Identifier  X Chromosome Location . Start  5831929
Chromosome Location . End  5834805 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13D11.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017429 F13D11.4 F13D11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13D11.4 F13D11.4 1032   X: 5832051-5832149

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13D11.4.1 5831929 5834805 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235073   221   X: 5831929-5832149 Caenorhabditis elegans
Exon235074   122   X: 5832197-5832318 Caenorhabditis elegans
Exon235075   70   X: 5832603-5832672 Caenorhabditis elegans
Exon235076   135   X: 5832726-5832860 Caenorhabditis elegans
Exon235077   76   X: 5833131-5833206 Caenorhabditis elegans
Exon235079   142   X: 5833610-5833751 Caenorhabditis elegans
Exon235080   85   X: 5833794-5833878 Caenorhabditis elegans
Exon235081   88   X: 5833926-5834013 Caenorhabditis elegans
Exon235082   83   X: 5834377-5834459 Caenorhabditis elegans
Exon235083   113   X: 5834592-5834704 Caenorhabditis elegans
Exon235084   53   X: 5834753-5834805 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13D11.4.1 5831929 5834805 -1

1 Sequence

Length
1188

1 Sequence Ontology Term

Identifier Name Description
transcript