WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06B11.4b.1 Sequence Name  W06B11.4b.1
Length (nt)  938   Chromosome Location  X: 5851954-5854263
Chromosome . Primary Identifier  X Chromosome Location . Start  5851954
Chromosome Location . End  5854263 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06B11.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001984 hog-1 W06B11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06B11.4b W06B11.4b 738   X: 5852065-5852124

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W06B11.4b.1 5851954 5854263 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235110   171   X: 5851954-5852124 Caenorhabditis elegans
Exon235112   216   X: 5852239-5852454 Caenorhabditis elegans
Exon235114   98   X: 5852502-5852599 Caenorhabditis elegans
Exon235116   136   X: 5853091-5853226 Caenorhabditis elegans
Exon235118   116   X: 5853292-5853407 Caenorhabditis elegans
Exon235119   51   X: 5853459-5853509 Caenorhabditis elegans
Exon235120   150   X: 5854114-5854263 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W06B11.4b.1 5851954 5854263 -1

1 Sequence

Length
938

1 Sequence Ontology Term

Identifier Name Description
transcript