WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W06B11.4a Sequence Name  W06B11.4a
Length (nt)  588   Chromosome Location  X: 5852065-5852124
Chromosome . Primary Identifier  X Chromosome Location . Start  5852065
Chromosome Location . End  5852124
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06B11.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35048 HOG-1, isoform a 22.3 195 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00054865
WBRNAi00077028
WBRNAi00077006
WBRNAi00019649
WBRNAi00036329
WBRNAi00076979

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W06B11.4a 5852065 5852124 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001984 hog-1 W06B11.4 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:W06B11.4a 5852065 5852124 -1
CDS:W06B11.4a 5852239 5852454 -1
CDS:W06B11.4a 5852502 5852599 -1
CDS:W06B11.4a 5853091 5853226 -1
CDS:W06B11.4a 5853292 5853369 -1

1 Sequence

Length
588

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W06B11.4a.1 W06B11.4a.1 700   X: 5851953-5853369