WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F49E10.5a Sequence Name  F49E10.5a
Length (nt)  2184   Chromosome Location  X: 5862757-5862915
Chromosome . Primary Identifier  X Chromosome Location . Start  5862757
Chromosome Location . End  5862915
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E10.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29966 CTBP-1, isoform a 79.6 727 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00047835
WBRNAi00047836
WBRNAi00015304
WBRNAi00015305
WBRNAi00103373

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F49E10.5a 5862757 5862915 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006424 ctbp-1 F49E10.5 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F49E10.5a 5862757 5862915 1
CDS:F49E10.5a 5863169 5863240 1
CDS:F49E10.5a 5863294 5863402 1
CDS:F49E10.5a 5864555 5864632 1
CDS:F49E10.5a 5869363 5869440 1
CDS:F49E10.5a 5869500 5869651 1
CDS:F49E10.5a 5870518 5870662 1
CDS:F49E10.5a 5870709 5870833 1
CDS:F49E10.5a 5870880 5871070 1
CDS:F49E10.5a 5871125 5871375 1
CDS:F49E10.5a 5871426 5871523 1
CDS:F49E10.5a 5871966 5872092 1
CDS:F49E10.5a 5872148 5872746 1

1 Sequence

Length
2184

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F49E10.5a.1 F49E10.5a.1 2834   X: 5862708-5873347