WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E10.4.1 Sequence Name  F49E10.4.1
Length (nt)  2084   Chromosome Location  X: 5875867-5881752
Chromosome . Primary Identifier  X Chromosome Location . Start  5875867
Chromosome Location . End  5881752 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E10.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018641 F49E10.4 F49E10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E10.4 F49E10.4 1839   X: 5875898-5876026

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49E10.4.1 5875867 5881752 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235162   160   X: 5875867-5876026 Caenorhabditis elegans
Exon235164   120   X: 5876284-5876403 Caenorhabditis elegans
Exon235165   135   X: 5876906-5877040 Caenorhabditis elegans
Exon235166   155   X: 5877339-5877493 Caenorhabditis elegans
Exon235167   226   X: 5877538-5877763 Caenorhabditis elegans
Exon235168   165   X: 5878223-5878387 Caenorhabditis elegans
Exon235169   91   X: 5878434-5878524 Caenorhabditis elegans
Exon235170   62   X: 5878568-5878629 Caenorhabditis elegans
Exon235171   92   X: 5878699-5878790 Caenorhabditis elegans
Exon235172   115   X: 5878847-5878961 Caenorhabditis elegans
Exon235173   154   X: 5879015-5879168 Caenorhabditis elegans
Exon235174   110   X: 5879960-5880069 Caenorhabditis elegans
Exon235175   128   X: 5880304-5880431 Caenorhabditis elegans
Exon235176   371   X: 5881382-5881752 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49E10.4.1 5875867 5881752 1

1 Sequence

Length
2084

1 Sequence Ontology Term

Identifier Name Description
transcript