WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H05L03.3.1 Sequence Name  H05L03.3.1
Length (nt)  600   Chromosome Location  X: 5904653-5905345
Chromosome . Primary Identifier  X Chromosome Location . Start  5904653
Chromosome Location . End  5905345 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H05L03.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019160 nlp-49 H05L03.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H05L03.3 H05L03.3 219   X: 5904670-5904729

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H05L03.3.1 5904653 5905345 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235227   77   X: 5904653-5904729 Caenorhabditis elegans
Exon235228   73   X: 5904776-5904848 Caenorhabditis elegans
Exon235229   450   X: 5904896-5905345 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H05L03.3.1 5904653 5905345 1

1 Sequence

Length
600

1 Sequence Ontology Term

Identifier Name Description
transcript