WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C46F4.1a Sequence Name  C46F4.1a
Length (nt)  1188   Chromosome Location  X: 5932768-5932946
Chromosome . Primary Identifier  X Chromosome Location . Start  5932768
Chromosome Location . End  5932946
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46F4.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE04219 EGL-6, isoform a 45.7 395 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00089836
WBRNAi00042613
WBRNAi00012040
WBRNAi00029870
WBRNAi00089923
WBRNAi00090083
WBRNAi00090241
WBRNAi00090370
WBRNAi00090417
WBRNAi00090464
WBRNAi00090511

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C46F4.1a 5932768 5932946 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001175 egl-6 C46F4.1 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C46F4.1a 5932768 5932946 1
CDS:C46F4.1a 5932999 5933112 1
CDS:C46F4.1a 5933160 5933236 1
CDS:C46F4.1a 5933288 5933454 1
CDS:C46F4.1a 5933506 5933841 1
CDS:C46F4.1a 5933944 5934166 1
CDS:C46F4.1a 5934276 5934367 1

1 Sequence

Length
1188

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C46F4.1a.1 C46F4.1a.1 1535   X: 5932586-5934532