WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22F4.3.1 Sequence Name  F22F4.3.1
Length (nt)  2442   Chromosome Location  X: 5984989-5992151
Chromosome . Primary Identifier  X Chromosome Location . Start  5984989
Chromosome Location . End  5992151 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22F4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002224 klp-13 F22F4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22F4.3 F22F4.3 2037   X: 5985192-5985218

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F22F4.3.1 5984989 5992151 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235415   230   X: 5984989-5985218 Caenorhabditis elegans
Exon235416   81   X: 5986932-5987012 Caenorhabditis elegans
Exon235417   111   X: 5987061-5987171 Caenorhabditis elegans
Exon235418   207   X: 5987216-5987422 Caenorhabditis elegans
Exon235419   129   X: 5987842-5987970 Caenorhabditis elegans
Exon235420   93   X: 5988083-5988175 Caenorhabditis elegans
Exon235421   84   X: 5988347-5988430 Caenorhabditis elegans
Exon235422   85   X: 5988476-5988560 Caenorhabditis elegans
Exon235423   63   X: 5988659-5988721 Caenorhabditis elegans
Exon235424   113   X: 5988778-5988890 Caenorhabditis elegans
Exon235425   109   X: 5988934-5989042 Caenorhabditis elegans
Exon235426   101   X: 5989909-5990009 Caenorhabditis elegans
Exon235427   83   X: 5990066-5990148 Caenorhabditis elegans
Exon235428   148   X: 5990195-5990342 Caenorhabditis elegans
Exon235429   172   X: 5990606-5990777 Caenorhabditis elegans
Exon235430   123   X: 5990828-5990950 Caenorhabditis elegans
Exon235431   160   X: 5991019-5991178 Caenorhabditis elegans
Exon235432   101   X: 5991759-5991859 Caenorhabditis elegans
Exon235433   249   X: 5991903-5992151 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F22F4.3.1 5984989 5992151 1

1 Sequence

Length
2442

1 Sequence Ontology Term

Identifier Name Description
transcript