WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22F4.2.1 Sequence Name  F22F4.2.1
Length (nt)  1633   Chromosome Location  X: 5996156-5998243
Chromosome . Primary Identifier  X Chromosome Location . Start  5996156
Chromosome Location . End  5998243 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22F4.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002125 inx-3 F22F4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22F4.2 F22F4.2 1263   X: 5996169-5996308

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22F4.2.1 5996156 5998243 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235438   153   X: 5996156-5996308 Caenorhabditis elegans
Exon235439   982   X: 5996708-5997689 Caenorhabditis elegans
Exon235440   498   X: 5997746-5998243 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22F4.2.1 5996156 5998243 1

1 Sequence

Length
1633

1 Sequence Ontology Term

Identifier Name Description
transcript