WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09B8.6a.1 Sequence Name  C09B8.6a.1
Length (nt)  1125   Chromosome Location  X: 6034463-6039644
Chromosome . Primary Identifier  X Chromosome Location . Start  6034463
Chromosome Location . End  6039644 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09B8.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002023 hsp-25 C09B8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09B8.6a C09B8.6a 660   X: 6034747-6034857

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09B8.6a.1 6034463 6039644 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235508   395   X: 6034463-6034857 Caenorhabditis elegans
Exon235512   124   X: 6034980-6035103 Caenorhabditis elegans
Exon235516   106   X: 6035669-6035774 Caenorhabditis elegans
Exon235520   138   X: 6037557-6037694 Caenorhabditis elegans
Exon235524   143   X: 6039094-6039236 Caenorhabditis elegans
Exon235526   219   X: 6039426-6039644 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09B8.6a.1 6034463 6039644 -1

1 Sequence

Length
1125

1 Sequence Ontology Term

Identifier Name Description
transcript