WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C45B2.6.2 Sequence Name  C45B2.6.2
Length (nt)  2769   Chromosome Location  X: 6052879-6057315
Chromosome . Primary Identifier  X Chromosome Location . Start  6052879
Chromosome Location . End  6057315 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C45B2.6.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016661 C45B2.6 C45B2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C45B2.6 C45B2.6 2289   X: 6053100-6053216

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C45B2.6.2 6052879 6057315 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235568   131   X: 6052879-6053009 Caenorhabditis elegans
Exon235569   159   X: 6053058-6053216 Caenorhabditis elegans
Exon235572   117   X: 6053452-6053568 Caenorhabditis elegans
Exon235574   230   X: 6053612-6053841 Caenorhabditis elegans
Exon235576   175   X: 6053897-6054071 Caenorhabditis elegans
Exon235578   112   X: 6054407-6054518 Caenorhabditis elegans
Exon235580   91   X: 6054563-6054653 Caenorhabditis elegans
Exon235582   97   X: 6054702-6054798 Caenorhabditis elegans
Exon235584   85   X: 6054843-6054927 Caenorhabditis elegans
Exon235586   270   X: 6054971-6055240 Caenorhabditis elegans
Exon235588   257   X: 6055290-6055546 Caenorhabditis elegans
Exon235590   254   X: 6055623-6055876 Caenorhabditis elegans
Exon235592   271   X: 6055925-6056195 Caenorhabditis elegans
Exon235594   156   X: 6056747-6056902 Caenorhabditis elegans
Exon235596   364   X: 6056952-6057315 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C45B2.6.2 6052879 6057315 1

1 Sequence

Length
2769

1 Sequence Ontology Term

Identifier Name Description
transcript