WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C45B2.6.1 Sequence Name  C45B2.6.1
Length (nt)  2498   Chromosome Location  X: 6053058-6057175
Chromosome . Primary Identifier  X Chromosome Location . Start  6053058
Chromosome Location . End  6057175 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C45B2.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016661 C45B2.6 C45B2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C45B2.6 C45B2.6 2289   X: 6053100-6053216

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C45B2.6.1 6053058 6057175 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235570   159   X: 6053058-6053216 Caenorhabditis elegans
Exon235571   117   X: 6053452-6053568 Caenorhabditis elegans
Exon235573   230   X: 6053612-6053841 Caenorhabditis elegans
Exon235575   175   X: 6053897-6054071 Caenorhabditis elegans
Exon235577   112   X: 6054407-6054518 Caenorhabditis elegans
Exon235579   91   X: 6054563-6054653 Caenorhabditis elegans
Exon235581   97   X: 6054702-6054798 Caenorhabditis elegans
Exon235583   85   X: 6054843-6054927 Caenorhabditis elegans
Exon235585   270   X: 6054971-6055240 Caenorhabditis elegans
Exon235587   257   X: 6055290-6055546 Caenorhabditis elegans
Exon235589   254   X: 6055623-6055876 Caenorhabditis elegans
Exon235591   271   X: 6055925-6056195 Caenorhabditis elegans
Exon235593   156   X: 6056747-6056902 Caenorhabditis elegans
Exon235595   224   X: 6056952-6057175 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C45B2.6.1 6053058 6057175 1

1 Sequence

Length
2498

1 Sequence Ontology Term

Identifier Name Description
transcript