WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C45B2.7 Sequence Name  C45B2.7
Length (nt)  2883   Chromosome Location  X: 6060975-6061096
Chromosome . Primary Identifier  X Chromosome Location . Start  6060975
Chromosome Location . End  6061096
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C45B2.7

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30905 PTR-4 110.8 960 Caenorhabditis elegans
 

Other

21 RNAi

WormBase ID
WBRNAi00024823
WBRNAi00042521
WBRNAi00008521
WBRNAi00076944
WBRNAi00066777
WBRNAi00076912
WBRNAi00076935
WBRNAi00064686
WBRNAi00064729
WBRNAi00064757
WBRNAi00087719
WBRNAi00068526
WBRNAi00068527
WBRNAi00068528
WBRNAi00068525
WBRNAi00111630
WBRNAi00001827
WBRNAi00068971
WBRNAi00068972
WBRNAi00076967
WBRNAi00092937

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C45B2.7 6060975 6061096 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004219 ptr-4 C45B2.7 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:C45B2.7 6060975 6061096 -1
CDS:C45B2.7 6061145 6061481 -1
CDS:C45B2.7 6061530 6061816 -1
CDS:C45B2.7 6061868 6062140 -1
CDS:C45B2.7 6062597 6062794 -1
CDS:C45B2.7 6062838 6063033 -1
CDS:C45B2.7 6063088 6063454 -1
CDS:C45B2.7 6063578 6063700 -1
CDS:C45B2.7 6063755 6064161 -1
CDS:C45B2.7 6064209 6064312 -1
CDS:C45B2.7 6065407 6065677 -1
CDS:C45B2.7 6065723 6065872 -1
CDS:C45B2.7 6065918 6065965 -1

1 Sequence

Length
2883

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C45B2.7.1 C45B2.7.1 3121   X: 6060758-6065986