WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C45B2.4a.1 Sequence Name  C45B2.4a.1
Length (nt)  1968   Chromosome Location  X: 6075509-6081875
Chromosome . Primary Identifier  X Chromosome Location . Start  6075509
Chromosome Location . End  6081875 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C45B2.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001587 lgc-58 C45B2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C45B2.4a C45B2.4a 1641   X: 6075624-6075661

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C45B2.4a.1 6075509 6081875 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235622   153   X: 6075509-6075661 Caenorhabditis elegans
Exon235635   119   X: 6075707-6075825 Caenorhabditis elegans
Exon235648   227   X: 6077296-6077522 Caenorhabditis elegans
Exon235661   145   X: 6077609-6077753 Caenorhabditis elegans
Exon235674   135   X: 6077808-6077942 Caenorhabditis elegans
Exon235687   103   X: 6078300-6078402 Caenorhabditis elegans
Exon235700   159   X: 6078456-6078614 Caenorhabditis elegans
Exon235714   56   X: 6079232-6079287 Caenorhabditis elegans
Exon235727   33   X: 6079535-6079567 Caenorhabditis elegans
Exon235734   131   X: 6080026-6080156 Caenorhabditis elegans
Exon235751   84   X: 6080475-6080558 Caenorhabditis elegans
Exon235756   187   X: 6080891-6081077 Caenorhabditis elegans
Exon235769   103   X: 6081168-6081270 Caenorhabditis elegans
Exon235797   333   X: 6081543-6081875 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C45B2.4a.1 6075509 6081875 1

1 Sequence

Length
1968

1 Sequence Ontology Term

Identifier Name Description
transcript