WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C45B2.4m.1 Sequence Name  C45B2.4m.1
Length (nt)  1812   Chromosome Location  X: 6075551-6081878
Chromosome . Primary Identifier  X Chromosome Location . Start  6075551
Chromosome Location . End  6081878 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C45B2.4m.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001587 lgc-58 C45B2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C45B2.4m C45B2.4m 1524   X: 6075624-6075661

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C45B2.4m.1 6075551 6081878 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235623   111   X: 6075551-6075661 Caenorhabditis elegans
Exon235647   119   X: 6075707-6075825 Caenorhabditis elegans
Exon235660   227   X: 6077296-6077522 Caenorhabditis elegans
Exon235673   145   X: 6077609-6077753 Caenorhabditis elegans
Exon235686   135   X: 6077808-6077942 Caenorhabditis elegans
Exon235699   103   X: 6078300-6078402 Caenorhabditis elegans
Exon235712   159   X: 6078456-6078614 Caenorhabditis elegans
Exon235726   56   X: 6079232-6079287 Caenorhabditis elegans
Exon235746   131   X: 6080026-6080156 Caenorhabditis elegans
Exon235768   187   X: 6080891-6081077 Caenorhabditis elegans
Exon235780   103   X: 6081168-6081270 Caenorhabditis elegans
Exon235798   336   X: 6081543-6081878 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C45B2.4m.1 6075551 6081878 1

1 Sequence

Length
1812

1 Sequence Ontology Term

Identifier Name Description
transcript