WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C45B2.4g.1 Sequence Name  C45B2.4g.1
Length (nt)  1845   Chromosome Location  X: 6075554-6081881
Chromosome . Primary Identifier  X Chromosome Location . Start  6075554
Chromosome Location . End  6081881 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C45B2.4g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001587 lgc-58 C45B2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C45B2.4g C45B2.4g 1557   X: 6075624-6075661

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C45B2.4g.1 6075554 6081881 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235624   108   X: 6075554-6075661 Caenorhabditis elegans
Exon235641   119   X: 6075707-6075825 Caenorhabditis elegans
Exon235654   227   X: 6077296-6077522 Caenorhabditis elegans
Exon235667   145   X: 6077609-6077753 Caenorhabditis elegans
Exon235680   135   X: 6077808-6077942 Caenorhabditis elegans
Exon235693   103   X: 6078300-6078402 Caenorhabditis elegans
Exon235706   159   X: 6078456-6078614 Caenorhabditis elegans
Exon235720   56   X: 6079232-6079287 Caenorhabditis elegans
Exon235733   33   X: 6079535-6079567 Caenorhabditis elegans
Exon235740   131   X: 6080026-6080156 Caenorhabditis elegans
Exon235762   187   X: 6080891-6081077 Caenorhabditis elegans
Exon235774   103   X: 6081168-6081270 Caenorhabditis elegans
Exon235799   339   X: 6081543-6081881 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C45B2.4g.1 6075554 6081881 1

1 Sequence

Length
1845

1 Sequence Ontology Term

Identifier Name Description
transcript