WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C45B2.4f.1 Sequence Name  C45B2.4f.1
Length (nt)  1578   Chromosome Location  X: 6075624-6081663
Chromosome . Primary Identifier  X Chromosome Location . Start  6075624
Chromosome Location . End  6081663 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C45B2.4f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001587 lgc-58 C45B2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C45B2.4f C45B2.4f 1578   X: 6075624-6075661

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C45B2.4f.1 6075624 6081663 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235629   38   X: 6075624-6075661 Caenorhabditis elegans
Exon235640   119   X: 6075707-6075825 Caenorhabditis elegans
Exon235653   227   X: 6077296-6077522 Caenorhabditis elegans
Exon235666   145   X: 6077609-6077753 Caenorhabditis elegans
Exon235679   135   X: 6077808-6077942 Caenorhabditis elegans
Exon235692   103   X: 6078300-6078402 Caenorhabditis elegans
Exon235705   159   X: 6078456-6078614 Caenorhabditis elegans
Exon235719   56   X: 6079232-6079287 Caenorhabditis elegans
Exon235732   33   X: 6079535-6079567 Caenorhabditis elegans
Exon235739   131   X: 6080026-6080156 Caenorhabditis elegans
Exon235761   187   X: 6080891-6081077 Caenorhabditis elegans
Exon235773   103   X: 6081168-6081270 Caenorhabditis elegans
Exon235784   21   X: 6081334-6081354 Caenorhabditis elegans
Exon235791   121   X: 6081543-6081663 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C45B2.4f.1 6075624 6081663 1

1 Sequence

Length
1578

1 Sequence Ontology Term

Identifier Name Description
transcript