WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C15H9.4.1 Sequence Name  C15H9.4.1
Length (nt)  2211   Chromosome Location  X: 6097643-6106107
Chromosome . Primary Identifier  X Chromosome Location . Start  6097643
Chromosome Location . End  6106107 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C15H9.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015800 C15H9.4 C15H9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C15H9.4 C15H9.4 1404   X: 6101217-6101355

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C15H9.4.1 6097643 6106107 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235835   70   X: 6097643-6097712 Caenorhabditis elegans
Exon235838   139   X: 6101217-6101355 Caenorhabditis elegans
Exon235839   143   X: 6101406-6101548 Caenorhabditis elegans
Exon235841   98   X: 6102090-6102187 Caenorhabditis elegans
Exon235843   116   X: 6102764-6102879 Caenorhabditis elegans
Exon235848   79   X: 6103706-6103784 Caenorhabditis elegans
Exon235850   151   X: 6103830-6103980 Caenorhabditis elegans
Exon235852   159   X: 6104281-6104439 Caenorhabditis elegans
Exon235854   219   X: 6104491-6104709 Caenorhabditis elegans
Exon235856   170   X: 6104940-6105109 Caenorhabditis elegans
Exon235858   867   X: 6105241-6106107 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C15H9.4.1 6097643 6106107 1

1 Sequence

Length
2211

1 Sequence Ontology Term

Identifier Name Description
transcript