WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C15H9.4.2 Sequence Name  C15H9.4.2
Length (nt)  2200   Chromosome Location  X: 6101158-6106107
Chromosome . Primary Identifier  X Chromosome Location . Start  6101158
Chromosome Location . End  6106107 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C15H9.4.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015800 C15H9.4 C15H9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C15H9.4 C15H9.4 1404   X: 6101217-6101355

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C15H9.4.2 6101158 6106107 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235837   198   X: 6101158-6101355 Caenorhabditis elegans
Exon235840   143   X: 6101406-6101548 Caenorhabditis elegans
Exon235842   98   X: 6102090-6102187 Caenorhabditis elegans
Exon235844   116   X: 6102764-6102879 Caenorhabditis elegans
Exon235849   79   X: 6103706-6103784 Caenorhabditis elegans
Exon235851   151   X: 6103830-6103980 Caenorhabditis elegans
Exon235853   159   X: 6104281-6104439 Caenorhabditis elegans
Exon235855   219   X: 6104491-6104709 Caenorhabditis elegans
Exon235857   170   X: 6104940-6105109 Caenorhabditis elegans
Exon235859   867   X: 6105241-6106107 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C15H9.4.2 6101158 6106107 1

1 Sequence

Length
2200

1 Sequence Ontology Term

Identifier Name Description
transcript