WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T25B2.2b.1 Sequence Name  T25B2.2b.1
Length (nt)  1613   Chromosome Location  X: 6169643-6173763
Chromosome . Primary Identifier  X Chromosome Location . Start  6169643
Chromosome Location . End  6173763 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25B2.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020786 T25B2.2 T25B2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T25B2.2b T25B2.2b 1269   X: 6169774-6169799

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T25B2.2b.1 6169643 6173763 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235981   157   X: 6169643-6169799 Caenorhabditis elegans
Exon235985   55   X: 6169848-6169902 Caenorhabditis elegans
Exon235988   75   X: 6169950-6170024 Caenorhabditis elegans
Exon235991   72   X: 6170196-6170267 Caenorhabditis elegans
Exon235994   117   X: 6170540-6170656 Caenorhabditis elegans
Exon235997   105   X: 6170700-6170804 Caenorhabditis elegans
Exon236000   210   X: 6171073-6171282 Caenorhabditis elegans
Exon236003   63   X: 6171342-6171404 Caenorhabditis elegans
Exon236006   39   X: 6171501-6171539 Caenorhabditis elegans
Exon236009   85   X: 6171633-6171717 Caenorhabditis elegans
Exon236012   86   X: 6172294-6172379 Caenorhabditis elegans
Exon236014   66   X: 6172429-6172494 Caenorhabditis elegans
Exon236018   65   X: 6172638-6172702 Caenorhabditis elegans
Exon236021   42   X: 6172750-6172791 Caenorhabditis elegans
Exon236024   25   X: 6173209-6173233 Caenorhabditis elegans
Exon236027   54   X: 6173280-6173333 Caenorhabditis elegans
Exon236030   45   X: 6173379-6173423 Caenorhabditis elegans
Exon236034   252   X: 6173512-6173763 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T25B2.2b.1 6169643 6173763 1

1 Sequence

Length
1613

1 Sequence Ontology Term

Identifier Name Description
transcript