WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13C5.4.1 Sequence Name  T13C5.4.1
Length (nt)  666   Chromosome Location  X: 6191605-6194241
Chromosome . Primary Identifier  X Chromosome Location . Start  6191605
Chromosome Location . End  6194241 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13C5.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020485 ceh-54 T13C5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13C5.4 T13C5.4 666   X: 6191605-6191852

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T13C5.4.1 6191605 6194241 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236074   248   X: 6191605-6191852 Caenorhabditis elegans
Exon236075   148   X: 6191905-6192052 Caenorhabditis elegans
Exon236076   255   X: 6192103-6192357 Caenorhabditis elegans
Exon236077   15   X: 6194227-6194241 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T13C5.4.1 6191605 6194241 -1

1 Sequence

Length
666

1 Sequence Ontology Term

Identifier Name Description
transcript