WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13C5.1a.1 Sequence Name  T13C5.1a.1
Length (nt)  1999   Chromosome Location  X: 6196927-6200823
Chromosome . Primary Identifier  X Chromosome Location . Start  6196927
Chromosome Location . End  6200823 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13C5.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000905 daf-9 T13C5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13C5.1a T13C5.1a 1719   X: 6196988-6197016

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T13C5.1a.1 6196927 6200823 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236078   90   X: 6196927-6197016 Caenorhabditis elegans
Exon236079   79   X: 6197303-6197381 Caenorhabditis elegans
Exon236081   337   X: 6198338-6198674 Caenorhabditis elegans
Exon236084   57   X: 6198728-6198784 Caenorhabditis elegans
Exon236087   224   X: 6199095-6199318 Caenorhabditis elegans
Exon236090   138   X: 6199367-6199504 Caenorhabditis elegans
Exon236093   116   X: 6199549-6199664 Caenorhabditis elegans
Exon236096   99   X: 6199714-6199812 Caenorhabditis elegans
Exon236099   255   X: 6199866-6200120 Caenorhabditis elegans
Exon236102   281   X: 6200172-6200452 Caenorhabditis elegans
Exon236107   323   X: 6200501-6200823 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T13C5.1a.1 6196927 6200823 1

1 Sequence

Length
1999

1 Sequence Ontology Term

Identifier Name Description
transcript