WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C14F11.2.2 Sequence Name  C14F11.2.2
Length (nt)  2217   Chromosome Location  X: 6208751-6216651
Chromosome . Primary Identifier  X Chromosome Location . Start  6208751
Chromosome Location . End  6216651 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14F11.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015779 lrch-1 C14F11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C14F11.2 C14F11.2 1917   X: 6208805-6208924

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C14F11.2.2 6208751 6216651 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236128   174   X: 6208751-6208924 Caenorhabditis elegans
Exon236131   75   X: 6208979-6209053 Caenorhabditis elegans
Exon236133   206   X: 6209106-6209311 Caenorhabditis elegans
Exon236135   196   X: 6209379-6209574 Caenorhabditis elegans
Exon236137   80   X: 6209623-6209702 Caenorhabditis elegans
Exon236139   226   X: 6210206-6210431 Caenorhabditis elegans
Exon236141   85   X: 6210822-6210906 Caenorhabditis elegans
Exon236144   155   X: 6211564-6211718 Caenorhabditis elegans
Exon236147   258   X: 6211817-6212074 Caenorhabditis elegans
Exon236149   130   X: 6212131-6212260 Caenorhabditis elegans
Exon236151   145   X: 6212305-6212449 Caenorhabditis elegans
Exon236153   142   X: 6213129-6213270 Caenorhabditis elegans
Exon236155   162   X: 6213750-6213911 Caenorhabditis elegans
Exon236159   183   X: 6216469-6216651 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C14F11.2.2 6208751 6216651 -1

1 Sequence

Length
2217

1 Sequence Ontology Term

Identifier Name Description
transcript