WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C14F11.2.1 Sequence Name  C14F11.2.1
Length (nt)  2024   Chromosome Location  X: 6208761-6213911
Chromosome . Primary Identifier  X Chromosome Location . Start  6208761
Chromosome Location . End  6213911 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14F11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015779 lrch-1 C14F11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C14F11.2 C14F11.2 1917   X: 6208805-6208924

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C14F11.2.1 6208761 6213911 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236129   164   X: 6208761-6208924 Caenorhabditis elegans
Exon236130   75   X: 6208979-6209053 Caenorhabditis elegans
Exon236132   206   X: 6209106-6209311 Caenorhabditis elegans
Exon236134   196   X: 6209379-6209574 Caenorhabditis elegans
Exon236136   80   X: 6209623-6209702 Caenorhabditis elegans
Exon236138   226   X: 6210206-6210431 Caenorhabditis elegans
Exon236140   85   X: 6210822-6210906 Caenorhabditis elegans
Exon236143   155   X: 6211564-6211718 Caenorhabditis elegans
Exon236146   258   X: 6211817-6212074 Caenorhabditis elegans
Exon236148   130   X: 6212131-6212260 Caenorhabditis elegans
Exon236150   145   X: 6212305-6212449 Caenorhabditis elegans
Exon236152   142   X: 6213129-6213270 Caenorhabditis elegans
Exon236154   162   X: 6213750-6213911 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C14F11.2.1 6208761 6213911 -1

1 Sequence

Length
2024

1 Sequence Ontology Term

Identifier Name Description
transcript