WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C14F11.3.1 Sequence Name  C14F11.3.1
Length (nt)  1540   Chromosome Location  X: 6226126-6230769
Chromosome . Primary Identifier  X Chromosome Location . Start  6226126
Chromosome Location . End  6230769 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14F11.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001803 lite-1 C14F11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C14F11.3 C14F11.3 1320   X: 6226278-6226379

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C14F11.3.1 6226126 6230769 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236176   254   X: 6226126-6226379 Caenorhabditis elegans
Exon236177   96   X: 6226428-6226523 Caenorhabditis elegans
Exon236178   75   X: 6226575-6226649 Caenorhabditis elegans
Exon236179   99   X: 6226699-6226797 Caenorhabditis elegans
Exon236180   297   X: 6226842-6227138 Caenorhabditis elegans
Exon236181   89   X: 6227186-6227274 Caenorhabditis elegans
Exon236182   124   X: 6227974-6228097 Caenorhabditis elegans
Exon236183   61   X: 6228147-6228207 Caenorhabditis elegans
Exon236184   128   X: 6228255-6228382 Caenorhabditis elegans
Exon236185   173   X: 6228440-6228612 Caenorhabditis elegans
Exon236186   144   X: 6230626-6230769 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C14F11.3.1 6226126 6230769 -1

1 Sequence

Length
1540

1 Sequence Ontology Term

Identifier Name Description
transcript