WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W05H9.1b Sequence Name  W05H9.1b
Length (nt)  1221   Chromosome Location  X: 6272090-6272353
Chromosome . Primary Identifier  X Chromosome Location . Start  6272090
Chromosome Location . End  6272353
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W05H9.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48152 LRO-1, isoform b 46.6 406 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00054851
WBRNAi00019640
WBRNAi00036316
WBRNAi00066632

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W05H9.1b 6272090 6272353 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021048 lro-1 W05H9.1 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:W05H9.1b 6272090 6272353 1
CDS:W05H9.1b 6272401 6272532 1
CDS:W05H9.1b 6272574 6272660 1
CDS:W05H9.1b 6272782 6273018 1
CDS:W05H9.1b 6273067 6273162 1
CDS:W05H9.1b 6273231 6273391 1
CDS:W05H9.1b 6273442 6273685 1

1 Sequence

Length
1221

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W05H9.1b.1 W05H9.1b.1 1305   X: 6272089-6273768