WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07H6.5a.1 Sequence Name  T07H6.5a.1
Length (nt)  2165   Chromosome Location  X: 6286449-6291732
Chromosome . Primary Identifier  X Chromosome Location . Start  6286449
Chromosome Location . End  6291732 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H6.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002976 lev-9 T07H6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H6.5a T07H6.5a 1869   X: 6286540-6286643

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07H6.5a.1 6286449 6291732 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236300   195   X: 6286449-6286643 Caenorhabditis elegans
Exon236303   156   X: 6286689-6286844 Caenorhabditis elegans
Exon236306   159   X: 6286887-6287045 Caenorhabditis elegans
Exon236309   183   X: 6288821-6289003 Caenorhabditis elegans
Exon236312   105   X: 6289051-6289155 Caenorhabditis elegans
Exon236315   161   X: 6289200-6289360 Caenorhabditis elegans
Exon236318   259   X: 6289415-6289673 Caenorhabditis elegans
Exon236321   174   X: 6290051-6290224 Caenorhabditis elegans
Exon236324   76   X: 6290294-6290369 Caenorhabditis elegans
Exon236327   128   X: 6290422-6290549 Caenorhabditis elegans
Exon236330   183   X: 6291099-6291281 Caenorhabditis elegans
Exon236335   386   X: 6291347-6291732 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07H6.5a.1 6286449 6291732 -1

1 Sequence

Length
2165

1 Sequence Ontology Term

Identifier Name Description
transcript