WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07H6.1a.1 Sequence Name  T07H6.1a.1
Length (nt)  2329   Chromosome Location  X: 6299942-6305218
Chromosome . Primary Identifier  X Chromosome Location . Start  6299942
Chromosome Location . End  6305218 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H6.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020330 cest-16 T07H6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H6.1a T07H6.1a 2094   X: 6300140-6300331

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07H6.1a.1 6299942 6305218 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236326   54   X: 6299942-6299995 Caenorhabditis elegans
Exon236330   192   X: 6300140-6300331 Caenorhabditis elegans
Exon236331   162   X: 6301027-6301188 Caenorhabditis elegans
Exon236335   264   X: 6301234-6301497 Caenorhabditis elegans
Exon236339   91   X: 6301539-6301629 Caenorhabditis elegans
Exon236343   109   X: 6302298-6302406 Caenorhabditis elegans
Exon236347   127   X: 6302592-6302718 Caenorhabditis elegans
Exon236351   90   X: 6302998-6303087 Caenorhabditis elegans
Exon236355   127   X: 6303132-6303258 Caenorhabditis elegans
Exon236359   154   X: 6303324-6303477 Caenorhabditis elegans
Exon236364   184   X: 6304003-6304186 Caenorhabditis elegans
Exon236369   70   X: 6304235-6304304 Caenorhabditis elegans
Exon236375   166   X: 6304403-6304568 Caenorhabditis elegans
Exon236381   63   X: 6304617-6304679 Caenorhabditis elegans
Exon236391   476   X: 6304743-6305218 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07H6.1a.1 6299942 6305218 1

1 Sequence

Length
2329

1 Sequence Ontology Term

Identifier Name Description
transcript