WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07H6.1b.2 Sequence Name  T07H6.1b.2
Length (nt)  2247   Chromosome Location  X: 6300138-6305173
Chromosome . Primary Identifier  X Chromosome Location . Start  6300138
Chromosome Location . End  6305173 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H6.1b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020330 cest-16 T07H6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H6.1b T07H6.1b 552   X: 6304277-6304304

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07H6.1b.2 6300138 6305173 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236327   194   X: 6300138-6300331 Caenorhabditis elegans
Exon236334   162   X: 6301027-6301188 Caenorhabditis elegans
Exon236338   264   X: 6301234-6301497 Caenorhabditis elegans
Exon236342   91   X: 6301539-6301629 Caenorhabditis elegans
Exon236346   124   X: 6302298-6302421 Caenorhabditis elegans
Exon236350   127   X: 6302592-6302718 Caenorhabditis elegans
Exon236353   90   X: 6302998-6303087 Caenorhabditis elegans
Exon236357   127   X: 6303132-6303258 Caenorhabditis elegans
Exon236362   154   X: 6303324-6303477 Caenorhabditis elegans
Exon236367   184   X: 6304003-6304186 Caenorhabditis elegans
Exon236372   70   X: 6304235-6304304 Caenorhabditis elegans
Exon236378   166   X: 6304403-6304568 Caenorhabditis elegans
Exon236384   63   X: 6304617-6304679 Caenorhabditis elegans
Exon236388   431   X: 6304743-6305173 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07H6.1b.2 6300138 6305173 1

1 Sequence

Length
2247

1 Sequence Ontology Term

Identifier Name Description
transcript