WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07H6.1b.1 Sequence Name  T07H6.1b.1
Length (nt)  2320   Chromosome Location  X: 6300138-6305217
Chromosome . Primary Identifier  X Chromosome Location . Start  6300138
Chromosome Location . End  6305217 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H6.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020330 cest-16 T07H6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H6.1b T07H6.1b 552   X: 6304277-6304304

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07H6.1b.1 6300138 6305217 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236328   194   X: 6300138-6300331 Caenorhabditis elegans
Exon236333   162   X: 6301027-6301188 Caenorhabditis elegans
Exon236337   264   X: 6301234-6301497 Caenorhabditis elegans
Exon236341   91   X: 6301539-6301629 Caenorhabditis elegans
Exon236345   109   X: 6302298-6302406 Caenorhabditis elegans
Exon236349   127   X: 6302592-6302718 Caenorhabditis elegans
Exon236354   261   X: 6302998-6303258 Caenorhabditis elegans
Exon236361   154   X: 6303324-6303477 Caenorhabditis elegans
Exon236366   184   X: 6304003-6304186 Caenorhabditis elegans
Exon236371   70   X: 6304235-6304304 Caenorhabditis elegans
Exon236377   166   X: 6304403-6304568 Caenorhabditis elegans
Exon236383   63   X: 6304617-6304679 Caenorhabditis elegans
Exon236389   475   X: 6304743-6305217 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07H6.1b.1 6300138 6305217 1

1 Sequence

Length
2320

1 Sequence Ontology Term

Identifier Name Description
transcript