WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C03B1.13.1 Sequence Name  C03B1.13.1
Length (nt)  1600   Chromosome Location  X: 6335279-6338051
Chromosome . Primary Identifier  X Chromosome Location . Start  6335279
Chromosome Location . End  6338051 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C03B1.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015381 C03B1.13 C03B1.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C03B1.13 C03B1.13 1521   X: 6335342-6335440

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C03B1.13.1 6335279 6338051 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236459   162   X: 6335279-6335440 Caenorhabditis elegans
Exon236460   91   X: 6335715-6335805 Caenorhabditis elegans
Exon236461   296   X: 6335851-6336146 Caenorhabditis elegans
Exon236462   114   X: 6336192-6336305 Caenorhabditis elegans
Exon236463   112   X: 6336362-6336473 Caenorhabditis elegans
Exon236464   115   X: 6336518-6336632 Caenorhabditis elegans
Exon236465   196   X: 6337125-6337320 Caenorhabditis elegans
Exon236466   140   X: 6337361-6337500 Caenorhabditis elegans
Exon236467   112   X: 6337554-6337665 Caenorhabditis elegans
Exon236468   168   X: 6337720-6337887 Caenorhabditis elegans
Exon236469   94   X: 6337958-6338051 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C03B1.13.1 6335279 6338051 -1

1 Sequence

Length
1600

1 Sequence Ontology Term

Identifier Name Description
transcript