WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00006316 Gene Name  sup-7
Sequence Name  ? C03B1.t1 Brief Description  sup-7 encodes a tryptophan tRNA; mutations were identified as informational suppressors that suppressed the same alleles as sup-5.
Organism  Caenorhabditis elegans Automated Description  Expressed in several structures, including body wall musculature; hermaphrodite gonad; hypodermis; intestine; and vulva.
Biotype  SO:0001272 Genetic Position  X :-2.93854 ±0.057047
Length (nt)  ? 72
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00006316

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C03B1.t1 C03B1.t1 72   X: 6371378-6371449
 

Other

0 CDSs

0 RNAi Result

4 Allele

Public Name
gk964260
st5
e2254
tm10077

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00006316 6371378 6371449 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
(See also table 1)   Expr13219 In young adults, sup-7 is predominantly expressed in neurons and in the vulva. However, in L4, sup-7 is ubiquitously expressed in all somatic tissues. Thus, during the transition to adulthood, sup-7 exhibits an overall decline in somatic expression and in particular, a loss of intestinal expression.  

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00006316 6371378 6371449 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
72

1 Sequence Ontology Term