WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22E5.6.1 Sequence Name  T22E5.6.1
Length (nt)  1181   Chromosome Location  X: 6413738-6416407
Chromosome . Primary Identifier  X Chromosome Location . Start  6413738
Chromosome Location . End  6416407 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22E5.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020692 T22E5.6 T22E5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22E5.6 T22E5.6 750   X: 6414162-6414380

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22E5.6.1 6413738 6416407 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236623   643   X: 6413738-6414380 Caenorhabditis elegans
Exon236624   86   X: 6415139-6415224 Caenorhabditis elegans
Exon236625   150   X: 6415273-6415422 Caenorhabditis elegans
Exon236626   136   X: 6416025-6416160 Caenorhabditis elegans
Exon236627   166   X: 6416242-6416407 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22E5.6.1 6413738 6416407 -1

1 Sequence

Length
1181

1 Sequence Ontology Term

Identifier Name Description
transcript