WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10C2.1.1 Sequence Name  K10C2.1.1
Length (nt)  7175   Chromosome Location  X: 6421036-6430610
Chromosome . Primary Identifier  X Chromosome Location . Start  6421036
Chromosome Location . End  6430610 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10C2.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019617 ctsa-2 K10C2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10C2.1 K10C2.1 6945   X: 6421129-6421575

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K10C2.1.1 6421036 6430610 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236632   540   X: 6421036-6421575 Caenorhabditis elegans
Exon236633   334   X: 6421679-6422012 Caenorhabditis elegans
Exon236634   78   X: 6422058-6422135 Caenorhabditis elegans
Exon236635   146   X: 6422179-6422324 Caenorhabditis elegans
Exon236636   325   X: 6422373-6422697 Caenorhabditis elegans
Exon236637   1247   X: 6422744-6423990 Caenorhabditis elegans
Exon236638   166   X: 6424040-6424205 Caenorhabditis elegans
Exon236639   183   X: 6424252-6424434 Caenorhabditis elegans
Exon236640   122   X: 6424480-6424601 Caenorhabditis elegans
Exon236641   144   X: 6424651-6424794 Caenorhabditis elegans
Exon236642   970   X: 6424840-6425809 Caenorhabditis elegans
Exon236643   438   X: 6425855-6426292 Caenorhabditis elegans
Exon236644   122   X: 6426339-6426460 Caenorhabditis elegans
Exon236645   144   X: 6426511-6426654 Caenorhabditis elegans
Exon236646   374   X: 6426703-6427076 Caenorhabditis elegans
Exon236647   619   X: 6427496-6428114 Caenorhabditis elegans
Exon236648   193   X: 6428161-6428353 Caenorhabditis elegans
Exon236649   119   X: 6428399-6428517 Caenorhabditis elegans
Exon236650   73   X: 6428561-6428633 Caenorhabditis elegans
Exon236651   525   X: 6429067-6429591 Caenorhabditis elegans
Exon236652   313   X: 6430298-6430610 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K10C2.1.1 6421036 6430610 -1

1 Sequence

Length
7175

1 Sequence Ontology Term

Identifier Name Description
transcript