WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C15B12.7a Sequence Name  C15B12.7a
Length (nt)  1635   Chromosome Location  X: 6500295-6500399
Chromosome . Primary Identifier  X Chromosome Location . Start  6500295
Chromosome Location . End  6500399
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C15B12.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54311 CDF-1, isoform a 59.2 544 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00107997
WBRNAi00067759
WBRNAi00040588
WBRNAi00010781
WBRNAi00028908
WBRNAi00023050
WBRNAi00023141
WBRNAi00023653
WBRNAi00023941
WBRNAi00108002

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C15B12.7a 6500295 6500399 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000393 cdf-1 C15B12.7 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C15B12.7a 6500295 6500399 -1
CDS:C15B12.7a 6500450 6500753 -1
CDS:C15B12.7a 6501264 6501405 -1
CDS:C15B12.7a 6501485 6502136 -1
CDS:C15B12.7a 6502536 6502698 -1
CDS:C15B12.7a 6502751 6502839 -1
CDS:C15B12.7a 6504434 6504613 -1

1 Sequence

Length
1635

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C15B12.7a.2 C15B12.7a.2 2228   X: 6499916-6505143
Transcript:C15B12.7a.1 C15B12.7a.1 2014   X: 6499916-6504613