WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22A3.3a.1 Sequence Name  F22A3.3a.1
Length (nt)  2033   Chromosome Location  X: 6505980-6509957
Chromosome . Primary Identifier  X Chromosome Location . Start  6505980
Chromosome Location . End  6509957 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22A3.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001619 glr-8 F22A3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22A3.3a F22A3.3a 1470   X: 6506884-6507045

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22A3.3a.1 6505980 6509957 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236924   381   X: 6505980-6506360 Caenorhabditis elegans
Exon236926   56   X: 6506730-6506785 Caenorhabditis elegans
Exon236928   195   X: 6506851-6507045 Caenorhabditis elegans
Exon236930   81   X: 6507096-6507176 Caenorhabditis elegans
Exon236932   104   X: 6507239-6507342 Caenorhabditis elegans
Exon236934   206   X: 6507668-6507873 Caenorhabditis elegans
Exon236936   141   X: 6507931-6508071 Caenorhabditis elegans
Exon236939   89   X: 6508117-6508205 Caenorhabditis elegans
Exon236941   85   X: 6508259-6508343 Caenorhabditis elegans
Exon236943   175   X: 6508926-6509100 Caenorhabditis elegans
Exon236945   226   X: 6509390-6509615 Caenorhabditis elegans
Exon236948   294   X: 6509664-6509957 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22A3.3a.1 6505980 6509957 1

1 Sequence

Length
2033

1 Sequence Ontology Term

Identifier Name Description
transcript