WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22A3.1b.1 Sequence Name  F22A3.1b.1
Length (nt)  2283   Chromosome Location  X: 6518883-6522656
Chromosome . Primary Identifier  X Chromosome Location . Start  6518883
Chromosome Location . End  6522656 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22A3.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017687 ets-4 F22A3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22A3.1b F22A3.1b 1392   X: 6519032-6519047

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22A3.1b.1 6518883 6522656 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236963   165   X: 6518883-6519047 Caenorhabditis elegans
Exon236964   72   X: 6519107-6519178 Caenorhabditis elegans
Exon236965   149   X: 6519232-6519380 Caenorhabditis elegans
Exon236966   84   X: 6519795-6519878 Caenorhabditis elegans
Exon236969   40   X: 6519930-6519969 Caenorhabditis elegans
Exon236973   147   X: 6520447-6520593 Caenorhabditis elegans
Exon236975   192   X: 6520640-6520831 Caenorhabditis elegans
Exon236977   86   X: 6520963-6521048 Caenorhabditis elegans
Exon236979   76   X: 6521156-6521231 Caenorhabditis elegans
Exon236981   102   X: 6521284-6521385 Caenorhabditis elegans
Exon236983   360   X: 6521433-6521792 Caenorhabditis elegans
Exon236984   810   X: 6521847-6522656 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22A3.1b.1 6518883 6522656 1

1 Sequence

Length
2283

1 Sequence Ontology Term

Identifier Name Description
transcript