WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22A3.5.1 Sequence Name  F22A3.5.1
Length (nt)  1331   Chromosome Location  X: 6522596-6530146
Chromosome . Primary Identifier  X Chromosome Location . Start  6522596
Chromosome Location . End  6530146 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22A3.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017690 ceh-60 F22A3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22A3.5 F22A3.5 1083   X: 6522783-6522863

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22A3.5.1 6522596 6530146 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236986   268   X: 6522596-6522863 Caenorhabditis elegans
Exon236987   71   X: 6522916-6522986 Caenorhabditis elegans
Exon236988   253   X: 6524374-6524626 Caenorhabditis elegans
Exon236989   136   X: 6526922-6527057 Caenorhabditis elegans
Exon236990   116   X: 6527539-6527654 Caenorhabditis elegans
Exon236991   75   X: 6528197-6528271 Caenorhabditis elegans
Exon236992   144   X: 6528410-6528553 Caenorhabditis elegans
Exon236993   68   X: 6529068-6529135 Caenorhabditis elegans
Exon236994   71   X: 6529335-6529405 Caenorhabditis elegans
Exon236995   129   X: 6530018-6530146 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22A3.5.1 6522596 6530146 -1

1 Sequence

Length
1331

1 Sequence Ontology Term

Identifier Name Description
transcript