WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T14E8.1c.1 Sequence Name  T14E8.1c.1
Length (nt)  3698   Chromosome Location  X: 6553287-6559507
Chromosome . Primary Identifier  X Chromosome Location . Start  6553287
Chromosome Location . End  6559507 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T14E8.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020504 svh-2 T14E8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T14E8.1c T14E8.1c 3057   X: 6553316-6553489

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T14E8.1c.1 6553287 6559507 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237013   203   X: 6553287-6553489 Caenorhabditis elegans
Exon237020   82   X: 6554127-6554208 Caenorhabditis elegans
Exon237024   109   X: 6554265-6554373 Caenorhabditis elegans
Exon237028   204   X: 6554421-6554624 Caenorhabditis elegans
Exon237032   251   X: 6554670-6554920 Caenorhabditis elegans
Exon237036   89   X: 6554968-6555056 Caenorhabditis elegans
Exon237040   216   X: 6555106-6555321 Caenorhabditis elegans
Exon237044   107   X: 6555366-6555472 Caenorhabditis elegans
Exon237048   103   X: 6555652-6555754 Caenorhabditis elegans
Exon237052   120   X: 6555802-6555921 Caenorhabditis elegans
Exon237056   189   X: 6555967-6556155 Caenorhabditis elegans
Exon237060   122   X: 6556204-6556325 Caenorhabditis elegans
Exon237064   393   X: 6556372-6556764 Caenorhabditis elegans
Exon237068   182   X: 6557008-6557189 Caenorhabditis elegans
Exon237072   253   X: 6557242-6557494 Caenorhabditis elegans
Exon237076   139   X: 6557542-6557680 Caenorhabditis elegans
Exon237080   167   X: 6557777-6557943 Caenorhabditis elegans
Exon237083   149   X: 6558499-6558647 Caenorhabditis elegans
Exon237088   620   X: 6558888-6559507 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T14E8.1c.1 6553287 6559507 1

1 Sequence

Length
3698

1 Sequence Ontology Term

Identifier Name Description
transcript