WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T14E8.1a.1 Sequence Name  T14E8.1a.1
Length (nt)  3659   Chromosome Location  X: 6553288-6559465
Chromosome . Primary Identifier  X Chromosome Location . Start  6553288
Chromosome Location . End  6559465 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T14E8.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020504 svh-2 T14E8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T14E8.1a T14E8.1a 3261   X: 6553316-6553489

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T14E8.1a.1 6553288 6559465 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237014   202   X: 6553288-6553489 Caenorhabditis elegans
Exon237017   82   X: 6554127-6554208 Caenorhabditis elegans
Exon237021   109   X: 6554265-6554373 Caenorhabditis elegans
Exon237025   204   X: 6554421-6554624 Caenorhabditis elegans
Exon237029   251   X: 6554670-6554920 Caenorhabditis elegans
Exon237033   89   X: 6554968-6555056 Caenorhabditis elegans
Exon237037   216   X: 6555106-6555321 Caenorhabditis elegans
Exon237041   107   X: 6555366-6555472 Caenorhabditis elegans
Exon237045   103   X: 6555652-6555754 Caenorhabditis elegans
Exon237049   120   X: 6555802-6555921 Caenorhabditis elegans
Exon237053   189   X: 6555967-6556155 Caenorhabditis elegans
Exon237057   122   X: 6556204-6556325 Caenorhabditis elegans
Exon237061   393   X: 6556372-6556764 Caenorhabditis elegans
Exon237065   182   X: 6557008-6557189 Caenorhabditis elegans
Exon237069   253   X: 6557242-6557494 Caenorhabditis elegans
Exon237073   139   X: 6557542-6557680 Caenorhabditis elegans
Exon237077   167   X: 6557777-6557943 Caenorhabditis elegans
Exon237084   153   X: 6558499-6558651 Caenorhabditis elegans
Exon237086   578   X: 6558888-6559465 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T14E8.1a.1 6553288 6559465 1

1 Sequence

Length
3659

1 Sequence Ontology Term

Identifier Name Description
transcript