WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T14E8.1b.1 Sequence Name  T14E8.1b.1
Length (nt)  3648   Chromosome Location  X: 6553288-6559465
Chromosome . Primary Identifier  X Chromosome Location . Start  6553288
Chromosome Location . End  6559465 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T14E8.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020504 svh-2 T14E8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T14E8.1b T14E8.1b 3093   X: 6553316-6553489

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T14E8.1b.1 6553288 6559465 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237015   202   X: 6553288-6553489 Caenorhabditis elegans
Exon237018   82   X: 6554127-6554208 Caenorhabditis elegans
Exon237022   109   X: 6554265-6554373 Caenorhabditis elegans
Exon237026   204   X: 6554421-6554624 Caenorhabditis elegans
Exon237030   251   X: 6554670-6554920 Caenorhabditis elegans
Exon237034   89   X: 6554968-6555056 Caenorhabditis elegans
Exon237038   216   X: 6555106-6555321 Caenorhabditis elegans
Exon237042   107   X: 6555366-6555472 Caenorhabditis elegans
Exon237046   103   X: 6555652-6555754 Caenorhabditis elegans
Exon237050   120   X: 6555802-6555921 Caenorhabditis elegans
Exon237054   189   X: 6555967-6556155 Caenorhabditis elegans
Exon237058   122   X: 6556204-6556325 Caenorhabditis elegans
Exon237062   393   X: 6556372-6556764 Caenorhabditis elegans
Exon237066   182   X: 6557008-6557189 Caenorhabditis elegans
Exon237070   253   X: 6557242-6557494 Caenorhabditis elegans
Exon237074   139   X: 6557542-6557680 Caenorhabditis elegans
Exon237078   167   X: 6557777-6557943 Caenorhabditis elegans
Exon237081   142   X: 6558499-6558640 Caenorhabditis elegans
Exon237087   578   X: 6558888-6559465 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T14E8.1b.1 6553288 6559465 1

1 Sequence

Length
3648

1 Sequence Ontology Term

Identifier Name Description
transcript