WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T14E8.3c.1 Sequence Name  T14E8.3c.1
Length (nt)  1790   Chromosome Location  X: 6564304-6569490
Chromosome . Primary Identifier  X Chromosome Location . Start  6564304
Chromosome Location . End  6569490 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T14E8.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020506 dop-3 T14E8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T14E8.3c T14E8.3c 1773   X: 6564304-6564406

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T14E8.3c.1 6564304 6569490 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237121   103   X: 6564304-6564406 Caenorhabditis elegans
Exon237124   127   X: 6564462-6564588 Caenorhabditis elegans
Exon237127   119   X: 6564643-6564761 Caenorhabditis elegans
Exon237130   330   X: 6565019-6565348 Caenorhabditis elegans
Exon237133   105   X: 6565395-6565499 Caenorhabditis elegans
Exon237136   91   X: 6565543-6565633 Caenorhabditis elegans
Exon237139   172   X: 6565688-6565859 Caenorhabditis elegans
Exon237143   99   X: 6566157-6566255 Caenorhabditis elegans
Exon237145   165   X: 6566308-6566472 Caenorhabditis elegans
Exon237150   148   X: 6567662-6567809 Caenorhabditis elegans
Exon237154   152   X: 6568449-6568600 Caenorhabditis elegans
Exon237158   179   X: 6569312-6569490 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T14E8.3c.1 6564304 6569490 -1

1 Sequence

Length
1790

1 Sequence Ontology Term

Identifier Name Description
transcript