WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28B4.3.1 Sequence Name  T28B4.3.1
Length (nt)  575   Chromosome Location  X: 6596425-6597121
Chromosome . Primary Identifier  X Chromosome Location . Start  6596425
Chromosome Location . End  6597121 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28B4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020886 ttr-6 T28B4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28B4.3 T28B4.3 426   X: 6596570-6596841

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28B4.3.1 6596425 6597121 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237195   417   X: 6596425-6596841 Caenorhabditis elegans
Exon237196   73   X: 6596907-6596979 Caenorhabditis elegans
Exon237197   85   X: 6597037-6597121 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28B4.3.1 6596425 6597121 -1

1 Sequence

Length
575

1 Sequence Ontology Term

Identifier Name Description
transcript