WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25B8.5a.1 Sequence Name  C25B8.5a.1
Length (nt)  1284   Chromosome Location  X: 6631927-6635273
Chromosome . Primary Identifier  X Chromosome Location . Start  6631927
Chromosome Location . End  6635273 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25B8.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016089 aexr-1 C25B8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25B8.5a C25B8.5a 1284   X: 6631927-6632040

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25B8.5a.1 6631927 6635273 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237292   114   X: 6631927-6632040 Caenorhabditis elegans
Exon237294   210   X: 6632089-6632298 Caenorhabditis elegans
Exon237296   82   X: 6633326-6633407 Caenorhabditis elegans
Exon237299   113   X: 6633454-6633566 Caenorhabditis elegans
Exon237300   159   X: 6633606-6633764 Caenorhabditis elegans
Exon237302   64   X: 6633822-6633885 Caenorhabditis elegans
Exon237304   95   X: 6633936-6634030 Caenorhabditis elegans
Exon237306   140   X: 6634081-6634220 Caenorhabditis elegans
Exon237308   148   X: 6634915-6635062 Caenorhabditis elegans
Exon237310   159   X: 6635115-6635273 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25B8.5a.1 6631927 6635273 -1

1 Sequence

Length
1284

1 Sequence Ontology Term

Identifier Name Description
transcript