WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C25B8.5b Sequence Name  C25B8.5b
Length (nt)  1269   Chromosome Location  X: 6631927-6632040
Chromosome . Primary Identifier  X Chromosome Location . Start  6631927
Chromosome Location . End  6632040
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25B8.5b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52585 AEXR-1, isoform b 48.1 422 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00041165
WBRNAi00011148
WBRNAi00029184

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C25B8.5b 6631927 6632040 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016089 aexr-1 C25B8.5 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:C25B8.5b 6631927 6632040 -1
CDS:C25B8.5b 6632089 6632298 -1
CDS:C25B8.5b 6633326 6633407 -1
CDS:C25B8.5b 6633454 6633551 -1
CDS:C25B8.5b 6633606 6633764 -1
CDS:C25B8.5b 6633822 6633885 -1
CDS:C25B8.5b 6633936 6634030 -1
CDS:C25B8.5b 6634081 6634220 -1
CDS:C25B8.5b 6634915 6635062 -1
CDS:C25B8.5b 6635115 6635273 -1

1 Sequence

Length
1269

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C25B8.5b.1 C25B8.5b.1 1269   X: 6631927-6635273